Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905063.1_cds_XP_016455215.1_49166
CDS Infomation

[gene=LOC107779325] [db_xref=GeneID:107779325] [protein=nuclear pore complex protein NUP88-like isoform X2] [protein_id=XP_016455215.1] [location=join(115641..115964,117260..117411,118940..119062,123373..123517,124105..124166,124604..124820,126813..126995,127299..127826)] [gbkey=CDS]
Sequence

ATGAGATACAATTTCGACTTGTCGGAGCCCCGTGAAGCTGACGACGCCGACGACGGTGGC
CGTCAATCAGCAACGCCAACTTCAGCTTCAACACCCAAAGAAGAACTGGAATGGCTACCC
TTACAAAACCACCCTGTATTTTGTGCTCCGAGCAGGGATGGCGCTGCCCATTCCTCCAAC
TTCACAATGCCTAAAAACCTTTTCGCGTGGGACGGAGCTTCTCGTCTCTACTTTTGGGAC
TCCTACAAAAGCTGTCTGCATCGGCTCTCCGTTCGATTGGGCGAACCGGACCGTACTTCC
GTCCTTGCCGCTTCTCCCTCTAAGGTACTGCAAGCTGATATGCAATTGGATTTTGAGGTT
CAGCGAATTTCCATTAATAGAAATGGATCAGCACTTTTCCTAGTTGGCTTGGATGGTTTA
TACGTCATGTATCTCTATGGGAGGACTTCGACCAAAGAAAATACAGTTATATGCCGGACA
GTTTCAGTTGGTTCAGAGATTTACTTTGACAAAAACAACTCAATACGCACGTTGCAGGTT
TGTTGGCACCCTTACAGTGACACCCATCTGGGAATCCTCTCTTCTGATTCCGTTTTCAGG
GTTTATGATCTGTCGTCGGCCCTTGGTCAGCCAGAACAGGAGTATTATTTGCAGCCTGTG
GAGCCTGGCAGTTCGCACAATGCTACATCAATCTGCCCCGTCGATTTTTCTTTTGGGGGT
GATCATTTGTGGGACAGGTTCAGTGTTTTTGTCTTGTTTAGTGATGGCTCAGTTTACATC
CTATGTCCTGTTGTTCCATTTGGAAGTGTGTACAAATGGGAATCTATACTGGAGTTATAT
AGTGATGCGCATGTGTTTGGTCTGAAATCATCGAATTCAAAAGCTGTGAAAAACTCAAAT
TTGGCAATCTCTTGGTTGGAAGCAACATTTCCTGAACTAGCCCGGAAAGAAGTTCATGCA
GAAAATGCTTCTGTGCTTAGAGCTCAGCCTTATGCTTTATTTGATGCGTCAATCTCATTG
CAGGGGCCCTTACGTAAAGTAAGTCACGGCGTTGAAGAAGACTCGGTTCATCCTCCAGTT
TGTGAAGGGCGTGCTGTCAGTTTTCTTTATGATTTAGTTAGCAAAGATTCTATTGTCGTA
ACTGCTTGGAGTGGTGGCCAGTTGCAAATTGATGCTTTAGCTGATGAAGTACAGCCGGTT
TGGAAGAGTAGTGGCAAAGAAGACATGATGAGAAGTCCCTCTGTGCATCCCGTTCTTAGC
ACTTTCCAAGGAGAAGCATCCTCAGCCTCCCCACTTTGTGGTTTCTTGGCTCTGTCAGAT
TCTTTCGGAGATTCATGGATCGTGGGTCTTACCCCTTCTAGCGAGTGTATAGTGTTGGAG
ATGGAGACTTGGAATACACTGGTTCCCCCAATTATTGATAAGGTTGACAAACTCAGAGAC
TCAGAGGGACCAAAAGATACAGATATTCCTACTATCATAAGCAAAGAGCTCCTTACCGGG
CCCAGGGTAGTTCTTTTGCCTCCTTCATCGCCTCATTTACGCTCCGTTGCTGCTGATTCA
ATTGAAGGCCGATCAACACTTCATCAGTATTTCAAGCTTTTTCATGAAAATTATGTGGAA
TATGCCCACAAGGTAACTTTGTGCTGTCGTTACGCTATAATCTTGATAGCAGTTGTGACT
TTTTCCTGCTGGACTTCTCTTTTTAAGTTAGATTTTGCCTTATTATCTATCTGA

Peptide Sequence

PEP ID

XP_016455215.1
PEP Infomation

PREDICTED: nuclear pore complex protein NUP88-like isoform X2 [Nicotiana tabacum]
Sequence

MRYNFDLSEPREADDADDGGRQSATPTSASTPKEELEWLPLQNHPVFCAPSRDGAAHSSN
FTMPKNLFAWDGASRLYFWDSYKSCLHRLSVRLGEPDRTSVLAASPSKVLQADMQLDFEV
QRISINRNGSALFLVGLDGLYVMYLYGRTSTKENTVICRTVSVGSEIYFDKNNSIRTLQV
CWHPYSDTHLGILSSDSVFRVYDLSSALGQPEQEYYLQPVEPGSSHNATSICPVDFSFGG
DHLWDRFSVFVLFSDGSVYILCPVVPFGSVYKWESILELYSDAHVFGLKSSNSKAVKNSN
LAISWLEATFPELARKEVHAENASVLRAQPYALFDASISLQGPLRKVSHGVEEDSVHPPV
CEGRAVSFLYDLVSKDSIVVTAWSGGQLQIDALADEVQPVWKSSGKEDMMRSPSVHPVLS
TFQGEASSASPLCGFLALSDSFGDSWIVGLTPSSECIVLEMETWNTLVPPIIDKVDKLRD
SEGPKDTDIPTIISKELLTGPRVVLLPPSSPHLRSVAADSIEGRSTLHQYFKLFHENYVE
YAHKVTLCCRYAIILIAVVTFSCWTSLFKLDFALLSI

Transcript Sequence

Gene sequence data has not been registered.